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Table 3 Identity of immune-related genes in lactation and Involution clusters

From: Gene expression profiling of mammary gland development reveals putative roles for death receptors and immune mediators in post-lactational regression

 

Inv1??

Inv2??

Inv3??

Inv4??

Lac 1??

Lac2??

Lac3??

Cytokines

Lifr

Il11ra2

Il12rb1

Osmr

Il1rn

Il1rl1l

Il1r2

 

Il1a

Ltbr

 

Il1r1

Il4ra

  
 

Il1b

  

Il10rb

Il7r

  
 

Il1r2

  

Csf1r

Il11r

  
 

Il11

   

Csf1

  
 

Il13

      

Chemokines

Cxcl1 (Gro1)

 

Ccl9

Ccl6

   
    

Ccl7

   
    

Ccl8

   
    

Ccl21a

   
    

Cxcl9

   
    

Cxcl14

   

Immune cell antigens

Lsp1

Cd80

Cd14

Cd79a

   
 

Cd19

Tnfrsf7 (Cd27)

 

Ly86

   
 

H2-M1

  

Cd86

   
 

Cd83

  

Tnfrsf4 (Ox40)

   
 

Tnfsf7 (Cd27l)

  

Lrp1 (Cd91)

   
 

Tnfrsf9 (Cd137)

      

Acute phase response

A2m

Hpxn

Cebpb

Hp

 

Hpxn

Orm1

 

Serpina1c

Orm2

Lcn2

Saa1

 

Nr3c1

 
  

Cebpd

 

Saa2

 

Serpina3g

 
    

Saa3

   
    

Saa-ps

   

Immunoglobulin

IgG-3 h-ch

Ig variable regn.

IgK l-ch (×2)

IgM h-ch (×1)

Ig l-ch

  
 

IgA h-ch

 

IgL l-ch

IgM l-ch (×2)

   
   

IgA h-ch

IgA h-ch (×4)

   
    

Ig K l-ch (×14)

   
    

Ig L l-ch (×3)

   
    

IgG l-ch (×4)

   
    

Ig H18

   

Immunoglobulin-related

Fcer1g (Fc rec)

Axcam

Necl1-pending

Sema4a

Sema4a

  
 

Pigr

  

Ltf

Sema4d

  
 

Sema4b

   

Igsf8

  
 

Sema7a

      

Complement

C1qa

 

C2

H2-Bf

C1qr

  
 

C3ar1

  

C3

C1qbp

  
 

C9

  

C4

C2

  
    

C2

   
    

C1qa

   
    

C1qc

   

Immune related

Tnfsf4 (OX40L)

E4bp4

Tgfb1

Casp1

Lig1

Irak1

Tnfaip2

 

Tnfsf6 (FasL)

Inhbb

Tgfb3

  

H2-Aa

Traf6

 

Tnfsf7 (Cd70)

Pafah1b2

Tnfrsf6 (Fas)

   

Tnfrsf11a

 

Tnfsf10

 

Myd88

    
 

Tnfsf12 (Tweak)

 

Emr1

    
 

Tnfrsf9 (Cd137)

 

Ecgf1

    
 

Il4i1

 

Pla2g2a

    
 

Gp5

 

Fadd

    
  1. The identity of immune-related transcripts was determined for each of the combined profile clusters illustrated in Fig. 4. Thus, transcripts belonging to the ontological category Immunity from each cluster were listed according to the immunological subcategories shown in the first column of the table. All gene names conform to the mouse genome informatics database [23], synonyms are included in brackets where appropriate. The number of transcripts of the same immunoglobulin chain genes are indicated. Complete genelists for these immunological categories are available on GeNet (see Method section).
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Breast Cancer Research

ISSN: 1465-542X

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