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Table 1 Mmp and Timp primers and probe sequences

From: Pleiotropic functions of the tumor- and metastasis-suppressing matrix metalloproteinase-8 in mammary cancer in MMTV-PyMT transgenic mice

 

Forward primer (5′-3′)

Reverse primer (5′-3′)

Probe (5′-FAM, TAMRA-3′)

Timp 1

CATGGAAAGCCTCTGTGGATATG

AAGCTGCAGGCACTGATGTG

CTCATCACGGGCCGCCTAAGGAAC

Timp 2

CCAGAAGAAGAGCCTGAACCA

GTCCATCCAGAGGCACTCATC

ACTCGCTGTCCCATGATCCCTTGC

Timp 3

GGCCTCAATTACCGCTACCA

CTGATAGCCAGGGTACCCAAAA

TGCTACTACTTGCCTTGTTTTGTGACCTCCA

Timp 4

TGCAGAGGGAGAGCCTGAA

GGTACATGGCACTGCATAGCA

CCACCAGAACTGTGGCTGCCAAATC

ColA

CGTGGACCAACAGCAGTGAA

GAGTGAGCCCAAGGGAGTGA

TCAACTTGTTCTATGTTACGGCTCATGAACTGG

ColB

TGGACCGACAACAATGAGGAT

TGGGAGAGTCCAAGGGAGTG

TCAACTTGTTCTATGTTACGGCTCATGAACTGG

MMP-2

AACTACGATGATGACCGGAAGTG

TGGCATGGCCGAACTCA

TCTGTCCTGACCAAGGATATAGCCTATTCCTCG′

MMP-3

GGAAATCAGTTCTGGGCTATACGA

TAGAAATGGCAGCATCGATCTTC

AGGTTATCCTAAAAGCATTCACACCCTGGGTCT

MMP-7

GCAGAATACTCACTAATGCCAAACA

CCGAGGTAAGTCTGAAGTATAGGATACA

CCAAAATGGCATTCCAGAATTGTCACCTAC

MMP-8

GATTCAGAAGAAACGTGGACTCAA

CATCAAGGCACCAGGATCAGT

CATGAATTTGGACATTCTTTGGGACTCTCTCAC

MMP-9

CGAACTTCGACACTGACAAGAAGT

GCACGCTGGAATGATCTAAGC

TCTGTCCAGACCAAGGGTACAGCCTGTTC

MMP-10

CCTGCTTTGTCCTTTGATTCAGT

CGGGATTCCAATGGGATCT

TCCTATTCTTTAAAGACAGGTACTTCTGGCGCA

MMP-11

ATTGATGCTGCCTTCCAGGAT

GGGCGAGGAAAGCCTTCTAG

TCCTTCGTGGCCATCTCTACTGGAAGTTTG

MMP-12

GAAACCCCCATCCTTGACAA

TTCCACCAGAAGAACCAGTCTTTAA

AGTCCACCATCAACTTTCTGTCACCAAAGC

MMP-13

GGGCTCTGAATGGTTATGACATTC

AGCGCTCAGTCTCTTCACCTCTT

AAGGTTATCCCAGAAAAATATCTGACCTGGGATTC

MMP-14

AGGAGACAGAGGTGATCATCATTG

GTCCCATGGCGTCTGAAGA

CCTGCCGGTACTACTGCTGCTCCTG

MMP-15

ATCCCCTATGACCGCATTGAC

CCCCTGCCAGACACTGATG

ACACAGCATGGAGACCCTGGCTACCC

MMP-16

GGCTACCTTCCACCGACTGA

CTTCATCCAGTCGATTGTGTTTCT

CTGCAGAGACCATGCAGTCAGCTCTAGCT

MMP-17

GGCAGTATGTTCCTGCACTTCA

GCTAGCACTGCCCTCAGGAT

CCTGTGGACCTCAGTCTCTGCCAAGG

MMP-19

GCCCATTTCCGGTCAGATG

AGGGATCCTCCAGACCACAAC

CCACAAGGGCCCGTATGAAGCAGC

MMP-20

GATCAGGAGGATTAAGGAGCTACAAA

GGCGGTAGTTAGCCACATCAG

CCAGAATACAATGAATGTGATCAAGAAGCCTCG

MMP-21

TCCAAAGAAGATGAGCCAAGTG

ACGCTGAATCGAGGTTTCTG

TTCCAGCAATAATGCCTCAAAACCACCC

MMP-23

CAGACTGTTGACCATGTCGGTAA

GAAGGAAAGAACTCTGTATGTGAGGTT

CCGCTACACGCTGACACCGGC

MMP-24

TATCATGGCTCCCTTCTACCAATAC

CTGCGGACCGGGAGTGT

CCAGCTGAGCCCTCTGGAGCCA

MMP-25

TGGCTGTCTGGGCTACTGAA

GGTAGGCCCGAGCAAAGTG

AATTCTCAGTACCAGGAGCCTGACATCATTATCC

MMP-27

AGGATAATAAAGTGCTTCCCAGGA

AAGAAATAGAGGAATCCATTATGTTGG

TCGCCTCCGTGTGGATGCTGTC

MMP-28

CCACTTGGACAGAGAGGATCAGT

AAGCGTTTCTTACGCCTCATTT

CTGCTTGCTGGACACCGAGCCAA

  1. MMP, matrix metalloproteinase; TIMP, tissue inhibitor of metalloproteinase.