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Table 2 Differential allelic expression ratios in fresh B cells

From: Extent of differential allelic expression of candidate breast cancer genes is similar in blood and breast

Gene

SNP

Heterozygotes with DAE

Mean DAE

SD

Min-Max

BRCA1

rs799917

T>C

44% (12/27)

0.67

0.12

0.43-0.80

  

C>T

26% (7/27)

1.41

0.22

1.21-1.83

BRCA2

rs144848

C>A

65% (24/37)

1.60

0.55

1.24-3.62

C1qA

rs172378

A>G

69% (11/16)

1.86

0.77

1.26-3.37

  

G>T

29% (5/17)

0.72

0.06

0.67-0.83

CCND3

rs1051130

T>G

24% (4/17)

1.36

0.11

1.25-1.51

  

C>A

5% (2/37)

0.79

0.01

0.78-0.80

EMSY

rs228611

A>C

5% (2/37)

1.38

0.21

1.23-1.53

GPX1

rs1050450

C>T

79% (11/14)

1.32

0.09

1.23-1.50

GPX4

rs713041

C>T

100% (21/21)

6.46

2.97

2.5-11.31

MLH3

rs175080

NA

0% (0/35)

NA

NA

NA

MTHFR

rs1801133

T>C

82% (27/33)

0.65

0.06

0.54-0.77

NBS1

rs709816

C>T

14%(3/21)

0.82

0.01

0.81-0.83

  

T>C

33% (7/21)

1.37

0.19

1.21-1.65

TP53

rs1042522

C>G

100% (16/16)

0.34

0.06

0.25-0.49

  

T>C

17% (5/29)

0.75

0.06

0.66-0.82

TRXR2

rs1139793

C>T

31% (9/29)

1.38

0.13

1.21-1.61

  1. DAE = differential allelic expression.