From: Gene expression profiling of the tumor microenvironment during breast cancer progression
Probe set | DCIS | IDC | Gene description |
---|---|---|---|
Hs.179729.0.S1_3p_a_at | 6.5 | 7.0 | COL10A1 – collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia) |
Hs.28792.0.S1_3p_at | 5.9 | 6.0 | NA |
4876385_3p_at | 4.9 | 6.3 | COL11A1 – collagen, type XI, alpha 1 |
g7019348_3p_at | 4.9 | 5.7 | GREM1 – gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis) |
Hs.179729.1.S1_3p_a_at | 4.8 | 5.5 | COL10A1 – collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia) |
Hs.297939.3.S1_3p_at | 4.6 | 5.1 | FNDC1 – fibronectin type III domain containing 1 |
37892_3p_at | 4.1 | 5.6 | COL11A1 – collagen, type XI, alpha 1 |
Hs.41271.0.S1_3p_at | 4.7 | 4.9 | COL8A1 – collagen, type VIII, alpha 1 |
g4502938_3p_s_at | 3.8 | 5.4 | COL11A1 – collagen, type XI, alpha 1 |
g186414_3p_a_at | 4.5 | 4.4 | INHBA – inhibin, beta A |
g8393842_3p_at | 4.4 | 4.4 | NOX4 – NADPH oxidase 4 |
Hs.288467.0.S1_3p_at | 3.8 | 4.8 | LRRC15 – leucine rich repeat containing 15 |
Hs.105700.0.S1_3p_a_at | 4.1 | 4.2 | SFRP4 – secreted frizzled-related protein 4 |
g4481752_3p_at | 3.6 | 4.4 | GJB2 – gap junction protein, beta 2, 26 kDa |
g8923132_3p_at | 3.6 | 4.3 | ASPN – asporin |
Hs.287820.2.A1_3p_s_at | 3.8 | 4.1 | FN1 – fibronectin 1 |
g8400733_3p_a_at | 3.5 | 3.9 | SFRP4 – secreted frizzled-related protein 4 |
g10863087_3p_a_at | 3.4 | 3.9 | GREM1 – gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis) |
g5174662_3p_at | 3.4 | 3.4 | S100P – S100 calcium binding protein P |
Hs.283713.0.A1_3p_at | 3.2 | 3.5 | CTHRC1 – collagen triple helix repeat containing 1 |
g4502844_3p_at | 3.1 | 3.5 | CILP – cartilage intermediate layer protein, nucleotide pyrophosphohydrolase |
Hs.76722.2.S1_3p_at | 2.8 | 3.7 | - |
Hs.70823.0.S3_3p_at | 3.3 | 3.2 | SULF1 – sulfatase 1 |
g4505186_3p_at | 3.3 | 3.0 | CXCL9 – chemokine (C-X-C motif) ligand 9 |
Hs.101302.0.S2_3p_s_at | 2.2 | 3.9 | COL12A1 – collagen, type XII, alpha 1 |
g11415037_3p_at | -3.2 | -3.0 | SLC22A3 – solute carrier family 22 (extraneuronal monoamine transporter), member 3 |
Hs.325823.0.A1_3p_at | -2.7 | -3.5 | CD36 – CD36 molecule (thrombospondin receptor) |
g4557418_3p_at | -2.7 | -3.6 | CD36 – CD36 molecule (thrombospondin receptor) |
g4557544_3p_a_at | -2.9 | -3.5 | EDN3 – endothelin 3 |
Hs2.147313.1.S1_3p_s_at | -2.9 | -3.5 | CD300LG – CD300 molecule-like family member g |
Hs.106283.4.S1_3p_at | -3.0 | -3.4 | KLHL13 – kelch-like 13 (Drosophila) |
g8400731_3p_a_at | -2.6 | -4.0 | SFRP1 – secreted frizzled-related protein 1 |
Hs.250692.0.S4_3p_at | -3.0 | -3.7 | HLF – hepatic leukemia factor |
g4826977_3p_at | -3.3 | -3.5 | RELN – reelin |
Hs.76325.1.A1_3p_x_at | -3.0 | -3.9 | IGJ – immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides |
Hs.76325.1.A1_3p_at | -3.1 | -4.0 | IGJ – immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides |
g10835124_3p_a_at | -4.0 | -3.1 | DCX – doublecortex; lissencephaly, X-linked (doublecortin) |
g7657105_3p_at | -3.2 | -4.0 | GABRP – gamma-aminobutyric acid A receptor, pi |
g4506328_3p_at | -3.4 | -3.9 | PTPRZ1 – protein tyrosine phosphatase, receptor-type, Z polypeptide 1 |
g4758377_3p_at | -3.9 | -3.4 | FIGF – c-fos induced growth factor (vascular endothelial growth factor D) |
g12707575_3p_at | -3.3 | -4.1 | OXTR – oxytocin receptor |
g13518036_3p_a_at | -2.5 | -4.9 | MATN2 – matrilin 2 |
g4559274_3p_a_at | -3.9 | -3.6 | ELF5 – E74-like factor 5 (ets domain transcription factor) |
Hs.10587.0.S1_3p_at | -2.5 | -5.1 | DMN – desmuslin |
Hs.49696.0.A1_3p_at | -3.7 | -4.0 | SCARA5 – scavenger receptor class A, member 5 (putative) |
g4557578_3p_at | -3.4 | -4.4 | FABP4 – fatty acid binding protein 4, adipocyte |
g13186315_3p_a_at | -3.5 | -4.3 | CAPN6 – calpain 6 |
g11991655_3p_at | -3.2 | -5.3 | C2orf40 – chromosome 2 open reading frame 40 |
g562105_3p_a_at | -4.9 | -4.5 | DLK1 – delta-like 1 homolog (Drosophila) |
g6005949_3p_at | -5.0 | -4.8 | WIF1 – WNT inhibitory factor 1 |